ConnectBooks
ConnectBooks connects Shopify to QuickBooks and Xero

Sync Shopify to QuickBooks, reconciled to the penny.

Shopify accounting and bookkeeping, synced to QuickBooks or Xero: every payout, online and POS, matched to your bank deposit, plus COGS and net profit per SKU.

Free 1:1 setup with a pro bookkeeper, on every plan · Live US support

Start your 30-day free trialConnect Shopify and QuickBooks and see every payout matched to your bank deposit.
  • Every payout matched to the bank deposit, to the penny
  • Net profit by SKU after fees, ads, returns and storage
  • Save 20+ hours monthly
  • Free 1:1 setup with a pro bookkeeper
Start free trial

99.97% customer satisfaction · Live US support

Trusted by 5,000+ sellers

Problem

One Shopify deposit. Dozens of transactions hiding inside it.

Shopify sends one net deposit. Inside are online and POS sales, fees and refunds. QuickBooks only sees the net deposit.

Sound familiar?

Shopify Payments, PayPal and other gateways each pay out on their own schedule, net of fees.

Your bank shows one deposit per gateway, but QuickBooks needs the sales, fees and refunds behind it.

Shopify POS sales and online orders end up mixed together, or missing.

Refunds land in a later payout than the sale they reverse.

You update product costs in a spreadsheet and hope they’re current.

The fix

What messy Shopify books cost you, and how ConnectBooks fixes it.

The problem

Hours you don’t get back.

Manually splitting payouts from every gateway, every week.

With ConnectBooks

Every payout from Shopify Payments, PayPal and more splits into sales, fees and refunds on its own, then posts to QuickBooks.

“We gained back three out of every four hours we used to waste on bookkeeping manually. Now we use that time to up our sales and margins.”
Esti Szegedin, CEO & Founder, Exponent Management
The problem

Profit you think you have.

Fees, returns and ad spend hide inside each SKU’s margin.

With ConnectBooks

Net profit by SKU after fees, refunds, ad spend and cost of goods, so you know which products actually make money.

The problem

A tax-time scramble.

1099-K forms report gross payments. If your books aren’t reconciled, the numbers won’t line up when your CPA asks.

With ConnectBooks

Every payout matched to the bank deposit, and 1099-K matching in 1 click.

The problem

Paying someone to translate Shopify.

Hours of an accountant’s time spent decoding payout reports.

With ConnectBooks

A pro bookkeeper maps every account the way your accountant wants it. After that it runs on its own.

Reviews

Sellers who stopped fixing their books.

266%net profit increaseGift Essentials
75%less time on bookkeepingExponent Management
10 hrssaved each weekDALT Brands
5 mina month to close the booksEagle Peak
“The most accurate software out there. And I’ve tried them all.”
Ben SchayaMom & Baby Supplies Inc.
“Their automation keeps us lean on accounting, and their reporting helped us triple our net profits.”
Robert GomezFounder, kaffe Products
“Advanced software but old fashion unparalleled Customer Service. You actually get to talk to a live human and they know their stuff cold.”
SamWVerified user, Intuit App Store

Rated 5 stars on Amazon, Google, and Intuit. 99.97% customer satisfaction rating.

Compare

Most tools stop at the payout.

Basic connectors get your deposits into QuickBooks or Xero. Cost of goods, inventory and profit by SKU are often missing, or sold as add-ons.

SpreadsheetsBasic connectorsConnectBooks
Payouts from every gateway matched to the depositHours every weekYesYes, to the penny, POS included
Cost of goodsKept by handNot included, or a paid add-onFIFO on every plan, plus landed cost
Inventory across your warehouses and 3PLA separate sheetNot included, or a paid add-onIn the same platform
Net profit per SKU, after fees and adsManual mathNot included, or a paid add-onIncluded
SetupYou do itUsually self-serveDone with you by a pro bookkeeper

Accounting

Built by bookkeepers who speak Shopify.

Shopify’s payout reports don’t look like anything your bookkeeper has seen before. That’s why ConnectBooks was built by bookkeepers, and why our live US support team knows QuickBooks, Xero and ecommerce bookkeeping.

Closed months stay closed

Every entry traceable to the order and SKU

PayPal, Shopify Payments and more

Reconcile orders paid through PayPal, Shopify Payments and more.

Shopify POS in the mix

In-store POS sales sync alongside online orders, so nothing is missing.

Every refund reconciled

Every refund categorized and reconciled.

Selling on Amazon too?

Shopify and Amazon in the same books, each payout matched to its own deposit.

Inventory

See where your cash is tied up.

The inventory age report shows how long each SKU has been in stock and how much cash it holds, in every warehouse.

  • Your own warehouse and 3PL, kept current from bills and transfers
  • FIFO cost on every plan; landed cost on Diamond and Platinum
  • Stock in transit tracked until it’s received
  • Restock forecasts from sales velocity and lead times
  • Real age and cash value of every unit
  • Selling on Amazon or Walmart too? FBA, AWD and WFS sync automatically

Sample data. FIFO valuation, landed cost, and every warehouse in one report.

The full inventory system is on the Platinum plan. Diamond keeps inventory value and landed cost in QuickBooks. Inventory setup takes a few guided sessions with a pro bookkeeper.

Profit

See which products actually make money.

Net profit by SKU and by store, after every fee, refund, ad dollar and cost of goods.

  • Margin and ROI on every product, for any day, week or month
  • Google Ads spend syncs automatically, plus Amazon and Walmart ads if you sell there too
  • Compare any 2 periods to see which products drove the change
“Before ConnectBooks, we thought we were making $2-3 profit on our hottest SKU, and actually we were losing money. It definitely tripled or more our bottom line.”
Hannah Jay, Bookkeeper, Gift Essentials

Pricing

Simple plans. Free 1:1 setup on every plan.

Gold

Clean books and profit by SKU.

Starts at$149/month
  • Every payout posted to QuickBooks or Xero as a daily summary
  • Fees, refunds and adjustments reconciled to the penny
  • Net profit and COGS for every SKU
Schedule a demo

Diamond

Every transaction by SKU in QuickBooks.

Starts at$199/month
  • Everything in Gold
  • Every sale, fee and return posted per SKU
  • Landed cost per item, freight and duties included
Schedule a demo
Most popular

Platinum

Inventory across every warehouse.

Starts at$349/month
  • Everything in Diamond
  • Full inventory system: stock, age, transfers and in-transit
  • Restock forecasting from sales velocity
Schedule a demo

Prices scale with your monthly orders and number of stores.

Guarantee

Books that balance, or your money back.

Our 100% accuracy guarantee: books that balance to the penny, or your money back.

Setup

Clean Shopify books in 3 steps.

No migration project. A pro bookkeeper does the setup with you.

1

Schedule your demo.

See ConnectBooks on a live call, then connect Shopify and QuickBooks (Online, Desktop or Enterprise) or Xero.

2

Get set up by a pro bookkeeper.

They map your accounts the way you (or your accountant) want.

3

Press sync.

Each payout posts with sales, fees and refunds broken out, ready to match to your bank deposit. Profit per SKU waits in the dashboard.

FAQ

Questions Shopify sellers ask.

Straight answers about ConnectBooks, Shopify, QuickBooks and Xero. Still have a question? Call 845 751 1600.

Does it work with my version of QuickBooks?

Yes: QuickBooks Online, Desktop and Enterprise, plus Xero.

Does it handle Shopify Payments and PayPal?

Yes. Reconcile orders paid through PayPal, Shopify Payments and more. Orders, taxes, fees, returns and payments post accurately in QuickBooks or Xero.

Is Shopify POS included?

Yes. POS sales sync alongside online orders.

How do I know the numbers are right?

Every entry traces back to its payout, and our 100% accuracy guarantee means books that balance to the penny, or your money back.

Will it duplicate what’s already in QuickBooks?

One clean entry per payout, ready to match to your deposit.

I sell on Amazon too.

Amazon, Walmart, eBay, TikTok Shop and Temu are supported in the same books.

What does it cost?

Plans start at $149/month. Every plan includes free 1:1 setup and 30 days free.

Who helps me if I’m stuck?

Live US phone, email and chat support. Call 845 751 1600.

Your next Shopify payout can be your first clean one.

Before

Splitting gateway deposits by hand, guessing at COGS, dreading tax time.

After

Press sync, every payout tied to your bank, real profit per SKU, Shopify and Amazon in one set of books.

Schedule a demo and see how clean your books can get.

Live US support from a team that knows marketplace bookkeeping

Rather talk now? Call 845 751 1600.